Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2996 | Not Available | Positive | 3795876 - 3796328 | 16627.2 |
| dinb superfamily protein | SAMN04488090_2997 | Not Available | Positive | 3796368 - 3796832 | 17183.7 |
| transcriptional regulator, hxlr family | SAMN04488090_2998 | Not Available | Negative | 3796840 - 3797274 | 17162.0 |
| doxx-like family protein | SAMN04488090_2999 | Not Available | Positive | 3797276 - 3797644 | 13189.8 |
| hypothetical protein | SAMN04488090_3000 | Not Available | Positive | 3797671 - 3798519 | 30601.3 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_3001 | Not Available | Positive | 3798703 - 3799458 | 26723.0 |
| hypothetical protein | SAMN04488090_3002 | Not Available | Positive | 3799513 - 3799863 | 12358.9 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN04488090_3003 | Not Available | Negative | 3799941 - 3800336 | 14477.0 |
| transcriptional regulator, arac family | SAMN04488090_3004 | Not Available | Negative | 3800396 - 3801157 | 28441.9 |
| predicted dioxygenase of extradiol dioxygenase family | SAMN04488090_3005 | Not Available | Positive | 3801325 - 3801681 | 13464.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
