Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_2966 | Not Available | Positive | 3761126 - 3761683 | 21463.3 |
| ribosomal protein s18 acetylase rimi | SAMN04488090_2967 | Not Available | Negative | 3762060 - 3762569 | 19627.3 |
| aaa atpase domain-containing protein | SAMN04488090_2968 | Not Available | Positive | 3762766 - 3763881 | 42552.0 |
| phosphoribosyl-atp pyrophosphohydrolase | SAMN04488090_2969 | Not Available | Negative | 3764094 - 3764567 | 17755.8 |
| helix-turn-helix | SAMN04488090_2970 | Not Available | Negative | 3765353 - 3765784 | 16224.1 |
| 2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferase | SAMN04488090_2971 | Not Available | Negative | 3766096 - 3766914 | 29154.3 |
| glyceraldehyde-3-phosphate dehydrogenase (nad+) | SAMN04488090_2972 | Not Available | Positive | 3767388 - 3768383 | 34961.7 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN04488090_2973 | Not Available | Negative | 3768569 - 3769855 | 47083.3 |
| hypothetical protein | SAMN04488090_2974 | Not Available | Negative | 3769913 - 3770902 | 34989.8 |
| sporulation related domain-containing protein | SAMN04488090_2975 | Not Available | Negative | 3770964 - 3772064 | 40918.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
