Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, marr family | SAMN04488090_2956 | Not Available | Positive | 3755168 - 3755632 | 17541.2 |
| hypothetical protein | SAMN04488090_2957 | Not Available | Positive | 3755637 - 3756152 | 19426.4 |
| hypothetical protein | SAMN04488090_2958 | Not Available | Positive | 3756323 - 3757609 | 44456.7 |
| isochorismate pyruvate lyase | SAMN04488090_2959 | Not Available | Negative | 3757681 - 3757995 | 12295.5 |
| hypothetical protein | SAMN04488090_2960 | Not Available | Positive | 3758226 - 3758378 | 5592.99 |
| transcriptional regulator, arsr family | SAMN04488090_2961 | Not Available | Positive | 3758686 - 3759021 | 12755.6 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04488090_2962 | Not Available | Positive | 3759018 - 3759485 | 17947.5 |
| doxx-like family protein | SAMN04488090_2963 | Not Available | Positive | 3759489 - 3759872 | 14324.9 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN04488090_2964 | Not Available | Positive | 3759880 - 3760461 | 22103.7 |
| activator of hsp90 atpase homolog 1-like protein | SAMN04488090_2965 | Not Available | Positive | 3760666 - 3761112 | 17310.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
