Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN04488090_2946 | Not Available | Negative | 3742582 - 3744300 | 63355.1 |
| hypothetical protein | SAMN04488090_2947 | Not Available | Positive | 3744571 - 3745311 | 26891.5 |
| hypothetical protein | SAMN04488090_2948 | Not Available | Positive | 3745456 - 3745686 | 8685.23 |
| signal transduction histidine kinase | SAMN04488090_2949 | Not Available | Positive | 3745683 - 3746999 | 48861.4 |
| hypothetical protein | SAMN04488090_2950 | Not Available | Positive | 3747031 - 3747303 | 10735.2 |
| calcineurin-like phosphoesterase | SAMN04488090_2951 | Not Available | Negative | 3747381 - 3749186 | 66606.3 |
| dna gyrase subunit a | SAMN04488090_2952 | Not Available | Positive | 3749286 - 3751928 | 97783.1 |
| tetratricopeptide repeat-containing protein | SAMN04488090_2953 | Not Available | Positive | 3752091 - 3753566 | 54023.1 |
| aspartate racemase | SAMN04488090_2954 | Not Available | Positive | 3753794 - 3754480 | 25024.2 |
| acetyltransferase (gnat) family protein | SAMN04488090_2955 | Not Available | Negative | 3754458 - 3755000 | 19901.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
