Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN04488090_2926 | Not Available | Negative | 3719210 - 3719575 | 14055.7 |
| peptidase t. metallo peptidase. merops family m20b | SAMN04488090_2927 | Not Available | Negative | 3719572 - 3720828 | 45980.3 |
| citrate synthase | SAMN04488090_2928 | Not Available | Positive | 3721027 - 3722313 | 47878.5 |
| allosteric nadp-dependent malic enzyme | SAMN04488090_2929 | Not Available | Positive | 3722696 - 3724969 | 82855.1 |
| methyltransferase domain-containing protein | SAMN04488090_2930 | Not Available | Positive | 3725056 - 3725790 | 27928.1 |
| glycosyl hydrolases family 43 | SAMN04488090_2931 | Not Available | Negative | 3725787 - 3726716 | 35471.9 |
| fusaric acid resistance protein-like | SAMN04488090_2932 | Not Available | Positive | 3726789 - 3727814 | 38117.5 |
| organic radical activating enzyme | SAMN04488090_2933 | Not Available | Positive | 3727894 - 3728526 | 23564.0 |
| wd40-like beta propeller repeat | SAMN04488090_2934 | Not Available | Positive | 3728523 - 3730472 | 72350.5 |
| thioredoxin reductase (nadph) | SAMN04488090_2935 | Not Available | Positive | 3730589 - 3731551 | 34357.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
