Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted lipoprotein | SAMN04488090_0280 | Not Available | Negative | 361950 - 363086 | 41197.1 |
| protein of unknown function | SAMN04488090_0281 | Not Available | Negative | 363152 - 364312 | 41539.2 |
| hypothetical protein | SAMN04488090_0282 | Not Available | Negative | 364483 - 365646 | 42835.9 |
| wd40-like beta propeller repeat | SAMN04488090_0283 | Not Available | Positive | 365744 - 367087 | 49673.3 |
| hypothetical protein | SAMN04488090_0284 | Not Available | Positive | 367163 - 368977 | 68297.9 |
| sugar phosphate isomerase/epimerase | SAMN04488090_0285 | Not Available | Positive | 369119 - 370024 | 34188.7 |
| l-alanine-dl-glutamate epimerase | SAMN04488090_0286 | Not Available | Positive | 370011 - 371183 | 42220.5 |
| catechol 2,3-dioxygenase | SAMN04488090_0287 | Not Available | Positive | 371195 - 371686 | 18566.9 |
| d-3-phosphoglycerate dehydrogenase | SAMN04488090_0288 | Not Available | Positive | 371683 - 372624 | 33868.0 |
| hypothetical protein | SAMN04488090_0289 | Not Available | Positive | 372986 - 374371 | 50920.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
