Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconolactonase | SAMN04488090_2896 | Not Available | Positive | 3677345 - 3678232 | 32787.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_2897 | Not Available | Positive | 3679203 - 3679793 | 22922.7 |
| fecr family protein | SAMN04488090_2898 | Not Available | Positive | 3679867 - 3680760 | 33859.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2899 | Not Available | Positive | 3680928 - 3684407 | 125396.0 |
| starch-binding associating with outer membrane | SAMN04488090_2900 | Not Available | Positive | 3684420 - 3686006 | 57859.3 |
| hypothetical protein | SAMN04488090_2901 | Not Available | Positive | 3686156 - 3686773 | 22940.4 |
| zinc carboxypeptidase | SAMN04488090_2902 | Not Available | Positive | 3686802 - 3689579 | 102115.0 |
| hypothetical protein | SAMN04488090_2903 | Not Available | Negative | 3689636 - 3690115 | 17709.6 |
| arac-type dna-binding protein | SAMN04488090_2904 | Not Available | Negative | 3690129 - 3691013 | 34800.9 |
| hypothetical protein | SAMN04488090_2905 | Not Available | Positive | 3691339 - 3693606 | 85740.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
