Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2886 | Not Available | Negative | 3660790 - 3661119 | 12110.2 |
| glyoxalase-like domain-containing protein | SAMN04488090_2887 | Not Available | Positive | 3661187 - 3661561 | 13863.1 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_2888 | Not Available | Negative | 3661673 - 3664060 | 89370.2 |
| histidine kinase | SAMN04488090_2889 | Not Available | Positive | 3664281 - 3665300 | 38918.9 |
| two component transcriptional regulator, lyttr family | SAMN04488090_2890 | Not Available | Positive | 3665297 - 3666004 | 26545.3 |
| y_y_y domain-containing protein | SAMN04488090_2891 | Not Available | Positive | 3666077 - 3668923 | 108075.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2892 | Not Available | Positive | 3669451 - 3672564 | 112067.0 |
| starch-binding associating with outer membrane | SAMN04488090_2893 | Not Available | Positive | 3672578 - 3674104 | 55615.0 |
| carbohydrate binding module (family 6) | SAMN04488090_2894 | Not Available | Positive | 3674200 - 3675942 | 65976.2 |
| glucosylceramidase | SAMN04488090_2895 | Not Available | Positive | 3675947 - 3677332 | 50848.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
