Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN04488090_2876 | Not Available | Positive | 3649018 - 3649593 | 21958.5 |
| hypothetical protein | SAMN04488090_2877 | Not Available | Positive | 3649683 - 3650060 | 13933.8 |
| ig-like domain (group 2) | SAMN04488090_2878 | Not Available | Positive | 3650131 - 3650886 | 27927.4 |
| hypothetical protein | SAMN04488090_2879 | Not Available | Positive | 3650941 - 3651162 | 8719.59 |
| acyl-coa hydrolase | SAMN04488090_2880 | Not Available | Positive | 3651216 - 3652538 | 47649.4 |
| hypothetical protein | SAMN04488090_2881 | Not Available | Negative | 3652761 - 3653285 | 19687.5 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488090_2882 | Not Available | Negative | 3653361 - 3654491 | 42694.8 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN04488090_2883 | Not Available | Positive | 3654695 - 3657910 | 119363.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2884 | Not Available | Negative | 3657989 - 3659866 | 70148.1 |
| predicted amidohydrolase | SAMN04488090_2885 | Not Available | Negative | 3660089 - 3660793 | 25244.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
