Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna modification gtpase | SAMN04488090_2863 | Not Available | Positive | 3628796 - 3630136 | 48527.1 |
| snf2 family n-terminal domain-containing protein | SAMN04488090_2866 | Not Available | Positive | 3630996 - 3634262 | 125771.0 |
| taqi-like c-terminal specificity domain-containing protein | SAMN04488090_2867 | Not Available | Positive | 3634278 - 3638033 | 146180.0 |
| aaa domain-containing protein | SAMN04488090_2868 | Not Available | Positive | 3638033 - 3639892 | 71860.7 |
| hypothetical protein | SAMN04488090_2870 | Not Available | Negative | 3642063 - 3642473 | 14864.0 |
| galactosamine-6-phosphate isomerase | SAMN04488090_2871 | Not Available | Negative | 3642903 - 3643637 | 26474.8 |
| hypothetical protein | SAMN04488090_2872 | Not Available | Negative | 3643744 - 3645198 | 54409.2 |
| hypothetical protein | SAMN04488090_2873 | Not Available | Negative | 3645206 - 3647197 | 74249.1 |
| lysophospholipase l1 | SAMN04488090_2874 | Not Available | Positive | 3647555 - 3648382 | 30906.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_2875 | Not Available | Positive | 3648389 - 3648964 | 22142.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
