Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2853 | Not Available | Negative | 3617045 - 3617935 | 34539.1 |
| hypothetical protein | SAMN04488090_2854 | Not Available | Negative | 3618054 - 3618479 | 16158.9 |
| o-succinylbenzoate synthase | SAMN04488090_2855 | Not Available | Negative | 3618518 - 3619669 | 42585.8 |
| lipid-a-disaccharide kinase | SAMN04488090_2856 | Not Available | Positive | 3619871 - 3620896 | 38892.7 |
| putative porin | SAMN04488090_2857 | Not Available | Positive | 3620936 - 3623023 | 80181.7 |
| pp_02822 | SAMN04488090_2858 | Not Available | Positive | 3623035 - 3623616 | Not Available |
| pd-(d/e)xk nuclease superfamily protein | SAMN04488090_2859 | Not Available | Positive | 3623623 - 3626493 | 110541.0 |
| predicted oxidoreductase | SAMN04488090_2860 | Not Available | Positive | 3626498 - 3627379 | 32449.8 |
| hypothetical protein | SAMN04488090_2861 | Not Available | Positive | 3627414 - 3628379 | 35641.4 |
| scp-2 sterol transfer family protein | SAMN04488090_2862 | Not Available | Positive | 3628467 - 3628751 | 9922.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
