Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2843 | Not Available | Positive | 3605670 - 3606338 | 25978.7 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488090_2844 | Not Available | Positive | 3606602 - 3607348 | 27104.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2845 | Not Available | Negative | 3607460 - 3608899 | 52015.6 |
| right handed beta helix region | SAMN04488090_2846 | Not Available | Negative | 3608906 - 3611017 | 75507.6 |
| uncharacterized membrane protein ycap, duf421 family | SAMN04488090_2847 | Not Available | Negative | 3611286 - 3611795 | 18702.2 |
| alkaline phosphatase d | SAMN04488090_2848 | Not Available | Negative | 3611876 - 3613189 | 50667.8 |
| hypothetical protein | SAMN04488090_2849 | Not Available | Negative | 3613446 - 3614090 | 23280.0 |
| diaminopimelate decarboxylase | SAMN04488090_2850 | Not Available | Positive | 3614311 - 3615546 | 45737.8 |
| hypothetical protein | SAMN04488090_2851 | Not Available | Positive | 3615543 - 3616061 | 18721.1 |
| homoserine o-acetyltransferase | SAMN04488090_2852 | Not Available | Positive | 3616058 - 3617044 | 35641.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
