Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488090_2834 | Not Available | Negative | 3588329 - 3592510 | 154691.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2835 | Not Available | Positive | 3592853 - 3596056 | 115156.0 |
| starch-binding associating with outer membrane | SAMN04488090_2836 | Not Available | Positive | 3596071 - 3597885 | 66336.9 |
| glucose-fructose oxidoreductase | SAMN04488090_2837 | Not Available | Positive | 3598130 - 3599212 | 39402.6 |
| enterochelin esterase | SAMN04488090_2838 | Not Available | Positive | 3599209 - 3601182 | 72792.1 |
| endo-1,4-beta-xylanase | SAMN04488090_2839 | Not Available | Positive | 3601217 - 3602281 | 40438.1 |
| alpha-l-fucosidase | SAMN04488090_2840 | Not Available | Negative | 3602318 - 3603946 | 60818.0 |
| Tmrna,resume consensus sequence (at 90): aatagctggcaattatag | Not Available | Not Available | Positive | 3604135 - 3604506 | Not Available |
| co-chaperonin groes (hsp10) | SAMN04488090_2841 | Not Available | Negative | 3604569 - 3604961 | 14555.5 |
| hypothetical protein | SAMN04488090_2842 | Not Available | Negative | 3605015 - 3605539 | 19598.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
