Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain dehydrogenase | SAMN04488090_2824 | Not Available | Negative | 3572694 - 3573509 | 30044.6 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN04488090_2825 | Not Available | Positive | 3573715 - 3574542 | 30331.1 |
| para-nitrobenzyl esterase | SAMN04488090_2826 | Not Available | Negative | 3574657 - 3576252 | 57318.1 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488090_2827 | Not Available | Positive | 3576405 - 3577133 | 27268.8 |
| isoquinoline 1-oxidoreductase, beta subunit | SAMN04488090_2828 | Not Available | Negative | 3577243 - 3579531 | 82213.9 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN04488090_2829 | Not Available | Negative | 3579557 - 3580012 | 16096.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2830 | Not Available | Positive | 3581480 - 3584977 | 123651.0 |
| npcbm-associated, new3 domain of alpha-galactosidase | SAMN04488090_2831 | Not Available | Positive | 3585456 - 3586289 | 29588.3 |
| abc-2 type transport system atp-binding protein | SAMN04488090_2832 | Not Available | Positive | 3586295 - 3587290 | 36372.4 |
| abc-2 type transport system permease protein | SAMN04488090_2833 | Not Available | Positive | 3587238 - 3588254 | 37335.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
