Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN04488090_2804 | Not Available | Negative | 3546772 - 3547476 | 26708.9 |
| arac-type dna-binding protein | SAMN04488090_2805 | Not Available | Negative | 3547567 - 3548418 | 32172.4 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN04488090_2806 | Not Available | Negative | 3548516 - 3549952 | 52289.7 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN04488090_2807 | Not Available | Negative | 3549942 - 3553085 | 113953.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488090_2808 | Not Available | Negative | 3553101 - 3554270 | 42830.7 |
| hypothetical protein | SAMN04488090_2809 | Not Available | Negative | 3554381 - 3554785 | 15493.5 |
| phosphotransferase enzyme family protein | SAMN04488090_2810 | Not Available | Positive | 3555227 - 3556342 | 41177.7 |
| transcriptional regulator, arac family | SAMN04488090_2811 | Not Available | Negative | 3556481 - 3557323 | 32536.1 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04488090_2812 | Not Available | Positive | 3557458 - 3558405 | 36455.0 |
| glyoxalase-like domain-containing protein | SAMN04488090_2813 | Not Available | Positive | 3558446 - 3558808 | 13926.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
