Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha1 family, tetracycline resistance protein | SAMN04488090_0270 | Not Available | Positive | 350034 - 351254 | 43248.4 |
| histidine kinase | SAMN04488090_0271 | Not Available | Positive | 351395 - 352519 | 43318.7 |
| carboxymethylenebutenolidase | SAMN04488090_0272 | Not Available | Positive | 352534 - 353391 | 31004.9 |
| transcriptional regulator, arac family | SAMN04488090_0273 | Not Available | Positive | 353395 - 354192 | 31177.0 |
| nad(p)h dehydrogenase (quinone) | SAMN04488090_0274 | Not Available | Positive | 354262 - 355125 | 32026.9 |
| uncharacterized membrane protein | SAMN04488090_0275 | Not Available | Positive | 355118 - 355621 | 18378.7 |
| protein of unknown function | SAMN04488090_0276 | Not Available | Positive | 355663 - 357213 | 58716.0 |
| hypothetical protein | SAMN04488090_0277 | Not Available | Positive | 357275 - 358201 | 34444.5 |
| fe(3+) dicitrate transport protein | SAMN04488090_0278 | Not Available | Negative | 358234 - 360639 | 90488.3 |
| vitamin k-dependent gamma-carboxylase | SAMN04488090_0279 | Not Available | Negative | 360617 - 361954 | 51355.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
