Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexapeptide repeat of succinyl-transferase | SAMN04488090_2794 | Not Available | Negative | 3531692 - 3532252 | 19882.9 |
| transcriptional regulator, arac family | SAMN04488090_2795 | Not Available | Negative | 3532351 - 3533220 | 33590.6 |
| hypothetical protein | SAMN04488090_2796 | Not Available | Positive | 3533871 - 3536996 | 106802.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2797 | Not Available | Positive | 3537002 - 3538063 | 37399.4 |
| helix-turn-helix | SAMN04488090_2798 | Not Available | Positive | 3538339 - 3538701 | 13941.7 |
| hypothetical protein | SAMN04488090_2799 | Not Available | Positive | 3539597 - 3539941 | 13116.0 |
| major paralogous domain-containing protein | SAMN04488090_2800 | Not Available | Positive | 3540478 - 3541071 | 21673.6 |
| alcohol dehydrogenase, propanol-preferring | SAMN04488090_2801 | Not Available | Positive | 3541171 - 3542205 | 36771.5 |
| ca2+-transporting atpase | SAMN04488090_2802 | Not Available | Positive | 3542308 - 3544830 | 90694.2 |
| hypothetical protein | SAMN04488090_2803 | Not Available | Negative | 3544879 - 3546594 | 63261.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
