Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine phosphorylase | SAMN04488090_2754 | Not Available | Negative | 3470460 - 3471329 | 32149.6 |
| gluconate kinase, fggy family | SAMN04488090_2755 | Not Available | Positive | 3471460 - 3472941 | 53201.9 |
| hypothetical protein | SAMN04488090_2756 | Not Available | Positive | 3473036 - 3473698 | 25096.5 |
| hypothetical protein | SAMN04488090_2757 | Not Available | Negative | 3474238 - 3475218 | 38310.5 |
| predicted n-acetyltransferase yhbs | SAMN04488090_2758 | Not Available | Negative | 3475215 - 3475685 | 17096.7 |
| protein of unknown function | SAMN04488090_2759 | Not Available | Positive | 3475865 - 3476611 | 27659.0 |
| hypothetical protein | SAMN04488090_2760 | Not Available | Positive | 3476662 - 3476871 | 8463.1 |
| chondroitin ac lyase | SAMN04488090_2761 | Not Available | Negative | 3477121 - 3480864 | 134868.0 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_2762 | Not Available | Negative | 3481123 - 3481743 | 24445.3 |
| fecr family protein | SAMN04488090_2763 | Not Available | Positive | 3482451 - 3483512 | 40420.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
