Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN04488090_2734 | Not Available | Positive | 3451078 - 3452022 | 34987.6 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN04488090_2735 | Not Available | Positive | 3452033 - 3453232 | 43546.4 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN04488090_2736 | Not Available | Negative | 3453290 - 3453931 | 24370.2 |
| putative auto-transporter adhesin, head gin domain | SAMN04488090_2737 | Not Available | Positive | 3454022 - 3454726 | 25115.0 |
| peptidase family m28 | SAMN04488090_2738 | Not Available | Negative | 3454816 - 3456156 | 49230.1 |
| hypothetical protein | SAMN04488090_2739 | Not Available | Negative | 3456393 - 3456863 | 17633.2 |
| peptidyl-trna hydrolase, pth1 family | SAMN04488090_2740 | Not Available | Negative | 3457106 - 3457666 | 21027.5 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04488090_2741 | Not Available | Positive | 3457816 - 3458352 | 20560.9 |
| aspartate carbamoyltransferase | SAMN04488090_2742 | Not Available | Positive | 3458437 - 3459357 | 33840.2 |
| hypothetical protein | SAMN04488090_2743 | Not Available | Negative | 3459433 - 3460398 | 34410.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
