Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2723 | Not Available | Negative | 3438741 - 3438920 | 6720.24 |
| d-lactate dehydrogenase | SAMN04488090_2725 | Not Available | Positive | 3441591 - 3442574 | 36511.9 |
| rhamnogalacturonyl hydrolase yesr | SAMN04488090_2726 | Not Available | Negative | 3443104 - 3444228 | 41961.2 |
| adenylate kinase | SAMN04488090_2727 | Not Available | Positive | 3444287 - 3444847 | 21057.9 |
| integrase/recombinase xerc | SAMN04488090_2728 | Not Available | Negative | 3444810 - 3445685 | 33909.3 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | SAMN04488090_2729 | Not Available | Positive | 3445784 - 3446551 | 27369.3 |
| hypothetical protein | SAMN04488090_2730 | Not Available | Negative | 3446572 - 3447321 | 27312.2 |
| pas domain s-box-containing protein | SAMN04488090_2731 | Not Available | Positive | 3447751 - 3449706 | 73802.3 |
| two component transcriptional regulator, lyttr family | SAMN04488090_2732 | Not Available | Positive | 3449703 - 3450395 | 26775.7 |
| dna-binding transcriptional regulator, lrp family | SAMN04488090_2733 | Not Available | Negative | 3450396 - 3450908 | 19895.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
