Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2713 | Not Available | Negative | 3427099 - 3427383 | 10425.4 |
| protein of unknown function | SAMN04488090_2714 | Not Available | Negative | 3427472 - 3427963 | 18738.7 |
| bacteriocin-protection, ydei or ompd-associated | SAMN04488090_2715 | Not Available | Negative | 3427963 - 3428613 | 24050.9 |
| superfamily ii dna and rna helicase | SAMN04488090_2716 | Not Available | Negative | 3428614 - 3429906 | 48470.5 |
| hypothetical protein | SAMN04488090_2717 | Not Available | Positive | 3430287 - 3432572 | 84555.7 |
| two component transcriptional regulator, luxr family | SAMN04488090_2718 | Not Available | Negative | 3432884 - 3433525 | 24163.4 |
| hypothetical protein | SAMN04488090_2719 | Not Available | Negative | 3433584 - 3434375 | 28741.9 |
| hypothetical protein | SAMN04488090_2720 | Not Available | Negative | 3434372 - 3435013 | 24860.7 |
| hypothetical protein | SAMN04488090_2721 | Not Available | Negative | 3435091 - 3435888 | 29659.8 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN04488090_2722 | Not Available | Negative | 3436105 - 3438714 | 97120.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
