Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0260 | Not Available | Positive | 340313 - 341524 | 44861.0 |
| polyisoprenoid-binding protein ycei | SAMN04488090_0261 | Not Available | Negative | 341579 - 342115 | 19187.5 |
| transcriptional regulator, tetr family | SAMN04488090_0262 | Not Available | Negative | 342178 - 342774 | 22632.2 |
| histidine kinase | SAMN04488090_0263 | Not Available | Positive | 342995 - 344053 | 40569.7 |
| histidine kinase | SAMN04488090_0264 | Not Available | Positive | 344050 - 345126 | 41079.0 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0265 | Not Available | Positive | 345123 - 345905 | 30047.2 |
| hypothetical protein | SAMN04488090_0266 | Not Available | Negative | 346204 - 347295 | 41444.7 |
| hypothetical protein | SAMN04488090_0267 | Not Available | Negative | 347292 - 348599 | 46333.8 |
| hypothetical protein | SAMN04488090_0268 | Not Available | Positive | 348751 - 349143 | 14732.5 |
| tigr03083 family protein | SAMN04488090_0269 | Not Available | Positive | 349146 - 349964 | 31066.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
