Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04488090_2693 | Not Available | Positive | 3398763 - 3400079 | 49525.7 |
| hypothetical protein | SAMN04488090_2694 | Not Available | Positive | 3400278 - 3401447 | 43798.6 |
| hypothetical protein | SAMN04488090_2695 | Not Available | Positive | 3401467 - 3402699 | 46125.0 |
| hypothetical protein | SAMN04488090_2696 | Not Available | Negative | 3402853 - 3404433 | 56370.0 |
| hypothetical protein | SAMN04488090_2697 | Not Available | Negative | 3404448 - 3405641 | 44880.9 |
| phytanoyl-coa dioxygenase (phyh) | SAMN04488090_2698 | Not Available | Positive | 3406068 - 3406937 | 33425.0 |
| hypothetical protein | SAMN04488090_2699 | Not Available | Positive | 3407009 - 3407836 | 30321.0 |
| protein of unknown function | SAMN04488090_2700 | Not Available | Positive | 3407964 - 3409010 | 39693.0 |
| 6-phosphogluconolactonase | SAMN04488090_2701 | Not Available | Positive | 3409074 - 3410189 | 39381.0 |
| putative acetyltransferase | SAMN04488090_2702 | Not Available | Positive | 3410191 - 3410661 | 17143.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
