Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap protein | SAMN04488090_2673 | Not Available | Negative | 3374166 - 3374948 | 29414.2 |
| protein of unknown function | SAMN04488090_2674 | Not Available | Negative | 3375073 - 3376590 | 51184.0 |
| hypothetical protein | SAMN04488090_2675 | Not Available | Positive | 3377082 - 3378122 | 39143.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_2676 | Not Available | Positive | 3378220 - 3378966 | 26072.2 |
| putative oxidoreductase | SAMN04488090_2677 | Not Available | Positive | 3379009 - 3379392 | 14082.8 |
| alcohol dehydrogenase groes-like domain-containing protein | SAMN04488090_2678 | Not Available | Negative | 3379393 - 3380352 | 34756.1 |
| dinb superfamily protein | SAMN04488090_2679 | Not Available | Negative | 3380355 - 3380861 | 18465.3 |
| protein of unknown function | SAMN04488090_2680 | Not Available | Negative | 3380886 - 3381377 | 18295.0 |
| sugar lactone lactonase yvre | SAMN04488090_2681 | Not Available | Positive | 3381395 - 3382432 | 38522.9 |
| hypothetical protein | SAMN04488090_2682 | Not Available | Negative | 3382544 - 3382732 | 6450.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
