Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2663 | Not Available | Negative | 3359911 - 3363012 | 114886.0 |
| hypothetical protein | SAMN04488090_2664 | Not Available | Positive | 3363054 - 3363701 | 24276.6 |
| protein of unknown function | SAMN04488090_2665 | Not Available | Negative | 3363652 - 3364080 | 15273.8 |
| pp_02632 | SAMN04488090_2666 | Not Available | Negative | 3364148 - 3364486 | Not Available |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN04488090_2667 | Not Available | Positive | 3365121 - 3365798 | 24368.3 |
| fn3 associated | SAMN04488090_2668 | Not Available | Positive | 3366097 - 3369329 | 119124.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2669 | Not Available | Positive | 3369330 - 3369671 | 12214.8 |
| pectate lyase superfamily protein | SAMN04488090_2670 | Not Available | Positive | 3369685 - 3371211 | 55001.9 |
| hypothetical protein | SAMN04488090_2671 | Not Available | Positive | 3371366 - 3372067 | 26264.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2672 | Not Available | Positive | 3372855 - 3373958 | 39182.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
