Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2653 | Not Available | Positive | 3343569 - 3343985 | 15428.8 |
| fe-s oxidoreductase | SAMN04488090_2654 | Not Available | Positive | 3344115 - 3347066 | 109471.0 |
| starch-binding associating with outer membrane | SAMN04488090_2655 | Not Available | Negative | 3347638 - 3349533 | 72440.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2656 | Not Available | Negative | 3349546 - 3353124 | 133395.0 |
| fecr family protein | SAMN04488090_2657 | Not Available | Negative | 3353225 - 3354397 | 44447.0 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_2658 | Not Available | Positive | 3354631 - 3355221 | 23459.2 |
| hypothetical protein | SAMN04488090_2659 | Not Available | Positive | 3355269 - 3355763 | 18358.3 |
| putative efflux protein, mate family | SAMN04488090_2660 | Not Available | Positive | 3356027 - 3357412 | 49344.4 |
| hypothetical protein | SAMN04488090_2661 | Not Available | Positive | 3357466 - 3358311 | 30127.8 |
| starch-binding associating with outer membrane | SAMN04488090_2662 | Not Available | Negative | 3358360 - 3359883 | 57187.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
