Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488090_2643 | Not Available | Negative | 3329098 - 3330630 | 56842.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2644 | Not Available | Negative | 3330673 - 3333852 | 115804.0 |
| 3-dehydroquinate synthase | SAMN04488090_2645 | Not Available | Positive | 3334314 - 3335336 | 38085.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_2646 | Not Available | Positive | 3335340 - 3335903 | 21869.3 |
| hypothetical protein | SAMN04488090_2647 | Not Available | Positive | 3335985 - 3336371 | 14239.9 |
| rnd family efflux transporter, mfp subunit | SAMN04488090_2648 | Not Available | Positive | 3336386 - 3337429 | 36624.0 |
| multidrug efflux pump subunit acrb | SAMN04488090_2649 | Not Available | Positive | 3337441 - 3340530 | 113486.0 |
| outer membrane protein tolc | SAMN04488090_2650 | Not Available | Positive | 3340527 - 3341840 | 48052.9 |
| hypothetical protein | SAMN04488090_2651 | Not Available | Positive | 3341967 - 3342587 | 23789.7 |
| hypothetical protein | SAMN04488090_2652 | Not Available | Positive | 3342642 - 3343313 | 25658.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
