Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2633 | Not Available | Positive | 3316983 - 3318056 | 41131.0 |
| l-aminopeptidase dmpa. serine peptidase. merops family s58 | SAMN04488090_2634 | Not Available | Positive | 3318144 - 3319250 | 39121.2 |
| trna dimethylallyltransferase | SAMN04488090_2635 | Not Available | Negative | 3319257 - 3320162 | 34281.0 |
| dna-3-methyladenine glycosylase ii | SAMN04488090_2636 | Not Available | Negative | 3320159 - 3320767 | 23524.4 |
| transporter, sss family | SAMN04488090_2637 | Not Available | Negative | 3320769 - 3322448 | 61783.9 |
| hypothetical protein | SAMN04488090_2638 | Not Available | Negative | 3322461 - 3322586 | 4815.83 |
| susd family protein | SAMN04488090_2639 | Not Available | Negative | 3322708 - 3324018 | 46960.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2640 | Not Available | Negative | 3324036 - 3327155 | 112931.0 |
| transcriptional regulator, deor family | SAMN04488090_2641 | Not Available | Positive | 3327425 - 3328171 | 27066.3 |
| protein of unknown function | SAMN04488090_2642 | Not Available | Negative | 3328336 - 3329091 | 25679.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
