Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl esterase/lipase | SAMN04488090_2613 | Not Available | Positive | 3296637 - 3297509 | 32457.9 |
| hypothetical protein | SAMN04488090_2614 | Not Available | Negative | 3297561 - 3298586 | 38855.8 |
| transcriptional regulator, tetr family | SAMN04488090_2615 | Not Available | Positive | 3298698 - 3299243 | 20519.5 |
| small multidrug resistance pump | SAMN04488090_2616 | Not Available | Positive | 3299240 - 3299569 | 11504.5 |
| hypothetical protein | SAMN04488090_2617 | Not Available | Positive | 3299639 - 3301024 | 51586.3 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04488090_2618 | Not Available | Positive | 3301065 - 3302252 | 44405.1 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN04488090_2619 | Not Available | Positive | 3302304 - 3303593 | 46774.7 |
| hypothetical protein | SAMN04488090_2620 | Not Available | Positive | 3303535 - 3304491 | 36656.9 |
| calx-beta domain-containing protein | SAMN04488090_2621 | Not Available | Positive | 3304638 - 3305513 | 30740.9 |
| cytochrome oxidase maturation protein, cbb3-type | SAMN04488090_2622 | Not Available | Positive | 3305800 - 3305943 | 5213.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
