Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0250 | Not Available | Negative | 329491 - 330249 | 29064.6 |
| hypothetical protein | SAMN04488090_0251 | Not Available | Negative | 330246 - 331196 | 34811.8 |
| hypothetical protein | SAMN04488090_0252 | Not Available | Negative | 331207 - 332859 | 60924.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04488090_0253 | Not Available | Negative | 333008 - 333943 | 35419.0 |
| predicted oxidoreductase | SAMN04488090_0254 | Not Available | Positive | 334047 - 335042 | 36264.7 |
| modulator of drug activity b | SAMN04488090_0255 | Not Available | Positive | 335092 - 335712 | 23811.9 |
| quinol monooxygenase ygin | SAMN04488090_0256 | Not Available | Positive | 335703 - 335996 | 11131.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488090_0257 | Not Available | Negative | 336031 - 336846 | 28939.1 |
| arac-type dna-binding protein | SAMN04488090_0258 | Not Available | Negative | 336827 - 337696 | 33299.1 |
| alpha-l-fucosidase 2 | SAMN04488090_0259 | Not Available | Positive | 337881 - 340316 | 89529.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
