Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_2593 | Not Available | Negative | 3274963 - 3276147 | 45788.9 |
| hypothetical protein | SAMN04488090_2594 | Not Available | Positive | 3276316 - 3277233 | 33690.3 |
| glutamyl peptidase. serine peptidase. merops family s09d | SAMN04488090_2595 | Not Available | Negative | 3277377 - 3279845 | 90139.2 |
| eama-like transporter family protein | SAMN04488090_2596 | Not Available | Negative | 3279901 - 3280833 | 34286.5 |
| lipopolysaccharide export system permease protein | SAMN04488090_2597 | Not Available | Negative | 3280864 - 3281943 | 41253.6 |
| iron (metal) dependent repressor, dtxr family | SAMN04488090_2598 | Not Available | Negative | 3282025 - 3282687 | 24769.6 |
| manganese transport protein | SAMN04488090_2599 | Not Available | Positive | 3282836 - 3284173 | 47963.4 |
| glycosyl hydrolase family 88 | SAMN04488090_2600 | Not Available | Negative | 3284239 - 3285423 | 44219.5 |
| 4-deoxy-l-threo-5-hexulose uronate isomerase | SAMN04488090_2601 | Not Available | Negative | 3285484 - 3286314 | 31148.7 |
| atp-binding cassette, subfamily b | SAMN04488090_2602 | Not Available | Positive | 3286603 - 3288366 | 65665.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
