Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2583 | Not Available | Negative | 3264230 - 3264625 | 15251.0 |
| transcriptional regulator, hxlr family | SAMN04488090_2584 | Not Available | Positive | 3264741 - 3265049 | 11349.0 |
| signal transduction histidine kinase | SAMN04488090_2585 | Not Available | Negative | 3265227 - 3266603 | 51358.2 |
| two component transcriptional regulator, winged helix family | SAMN04488090_2586 | Not Available | Negative | 3266660 - 3267397 | 27815.9 |
| protein of unknown function | SAMN04488090_2587 | Not Available | Negative | 3267495 - 3268067 | 21487.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_2588 | Not Available | Negative | 3268149 - 3268688 | 21154.3 |
| imidazolonepropionase | SAMN04488090_2589 | Not Available | Negative | 3268827 - 3270113 | 46113.4 |
| imidazolonepropionase | SAMN04488090_2590 | Not Available | Negative | 3270138 - 3273209 | 111813.0 |
| protein of unknown function | SAMN04488090_2591 | Not Available | Negative | 3273406 - 3274206 | 31205.6 |
| glycosyl transferase family 2 | SAMN04488090_2592 | Not Available | Negative | 3274203 - 3274979 | 29502.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
