Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2573 | Not Available | Positive | 3255604 - 3256629 | 37896.0 |
| cytochrome c2 | SAMN04488090_2574 | Not Available | Negative | 3256683 - 3257477 | 29906.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_2575 | Not Available | Positive | 3257724 - 3258311 | 22439.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_2576 | Not Available | Positive | 3258283 - 3259722 | 52669.5 |
| rieske fe-s protein | SAMN04488090_2577 | Not Available | Positive | 3259898 - 3260332 | 15320.1 |
| hypothetical protein | SAMN04488090_2578 | Not Available | Positive | 3260404 - 3261318 | 33394.9 |
| hypothetical protein | SAMN04488090_2579 | Not Available | Positive | 3261320 - 3261862 | 20288.8 |
| hypothetical protein | SAMN04488090_2580 | Not Available | Negative | 3261934 - 3262332 | 14741.1 |
| sulfite dehydrogenase (cytochrome) subunit sora apoprotein | SAMN04488090_2581 | Not Available | Negative | 3262329 - 3263552 | 45314.4 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488090_2582 | Not Available | Positive | 3263706 - 3264176 | 18038.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
