Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2563 | Not Available | Positive | 3244675 - 3245232 | 21862.5 |
| hypothetical protein | SAMN04488090_2564 | Not Available | Positive | 3245280 - 3246860 | 58192.2 |
| peptidase family m23 | SAMN04488090_2565 | Not Available | Negative | 3246862 - 3247548 | 25513.9 |
| proton-dependent oligopeptide transporter, pot family | SAMN04488090_2566 | Not Available | Positive | 3247626 - 3249134 | 55712.3 |
| type iv secretory pathway, virj component | SAMN04488090_2567 | Not Available | Positive | 3249247 - 3250623 | 49286.8 |
| hypothetical protein | SAMN04488090_2568 | Not Available | Positive | 3250743 - 3251291 | 19817.6 |
| protein of unknown function | SAMN04488090_2569 | Not Available | Positive | 3251313 - 3251879 | 21567.4 |
| hypothetical protein | SAMN04488090_2570 | Not Available | Positive | 3251913 - 3252548 | 23106.4 |
| lysylphosphatidylglycerol synthase tm region | SAMN04488090_2571 | Not Available | Positive | 3252613 - 3254913 | 85047.4 |
| putative lumazine-binding | SAMN04488090_2572 | Not Available | Negative | 3254914 - 3255354 | 16488.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
