Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pap2 superfamily protein | SAMN04488090_2553 | Not Available | Positive | 3234145 - 3235446 | 48696.6 |
| hypothetical protein | SAMN04488090_2554 | Not Available | Positive | 3235705 - 3236553 | 33246.9 |
| conserved hypothetical protein | SAMN04488090_2555 | Not Available | Negative | 3236534 - 3237286 | 27153.8 |
| zinc-ribbon domain-containing protein | SAMN04488090_2556 | Not Available | Positive | 3237478 - 3238797 | 50828.6 |
| malate dehydrogenase (nad) | SAMN04488090_2557 | Not Available | Negative | 3238871 - 3239806 | 32784.7 |
| ketosteroid isomerase homolog | SAMN04488090_2558 | Not Available | Positive | 3240254 - 3240685 | 16383.8 |
| maoc like domain-containing protein | SAMN04488090_2559 | Not Available | Positive | 3240750 - 3241151 | 14904.8 |
| histone h1-like protein hc1 | SAMN04488090_2560 | Not Available | Negative | 3241209 - 3241391 | 6916.25 |
| glycine c-acetyltransferase | SAMN04488090_2561 | Not Available | Negative | 3241623 - 3242885 | 46546.4 |
| propionyl-coa carboxylase alpha chain | SAMN04488090_2562 | Not Available | Positive | 3243206 - 3244696 | 54355.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
