Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema protein | SAMN04488090_2543 | Not Available | Positive | 3220638 - 3221219 | 21250.3 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN04488090_2544 | Not Available | Positive | 3221225 - 3221647 | 15885.7 |
| uncharacterized protein | SAMN04488090_2545 | Not Available | Positive | 3221665 - 3222435 | 27245.4 |
| geranylgeranyl diphosphate synthase, type ii | SAMN04488090_2546 | Not Available | Negative | 3222538 - 3223509 | 36424.0 |
| protein of unknown function, duf255 | SAMN04488090_2547 | Not Available | Positive | 3223621 - 3224196 | 22189.6 |
| cysteine synthase b | SAMN04488090_2548 | Not Available | Positive | 3224230 - 3225105 | 31759.0 |
| hypothetical protein | SAMN04488090_2549 | Not Available | Negative | 3225001 - 3225213 | 8173.59 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2550 | Not Available | Positive | 3226060 - 3229194 | 113317.0 |
| starch-binding associating with outer membrane | SAMN04488090_2551 | Not Available | Positive | 3229204 - 3230817 | 58813.1 |
| repeat domain-containing protein | SAMN04488090_2552 | Not Available | Positive | 3230897 - 3234148 | 120965.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
