Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh dehydrogenase subunit b | SAMN04488090_2533 | Not Available | Positive | 3207197 - 3207733 | 19934.3 |
| nadh dehydrogenase subunit c | SAMN04488090_2534 | Not Available | Positive | 3207730 - 3208218 | 18709.1 |
| aaa domain-containing protein | SAMN04488090_2535 | Not Available | Negative | 3208212 - 3212081 | 148691.0 |
| glycosyl transferase family 2 | SAMN04488090_2536 | Not Available | Positive | 3212308 - 3213051 | 28522.7 |
| dolichol-phosphate mannosyltransferase | SAMN04488090_2537 | Not Available | Negative | 3213092 - 3213841 | 28179.4 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488090_2538 | Not Available | Positive | 3214303 - 3215439 | 44121.6 |
| hypothetical protein | SAMN04488090_2539 | Not Available | Positive | 3215439 - 3216845 | 53955.5 |
| dolichol-phosphate mannosyltransferase | SAMN04488090_2540 | Not Available | Positive | 3216858 - 3217817 | 36369.2 |
| hypothetical protein | SAMN04488090_2541 | Not Available | Positive | 3217801 - 3219462 | 62836.6 |
| dolichol-phosphate mannosyltransferase | SAMN04488090_2542 | Not Available | Positive | 3219514 - 3220461 | 36226.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
