Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane transport energization protein tonb | SAMN04488090_2523 | Not Available | Negative | 3199389 - 3200228 | 30431.6 |
| outer membrane transport energization protein exbd | SAMN04488090_2524 | Not Available | Negative | 3200325 - 3200867 | 19920.2 |
| outer membrane transport energization protein exbd | SAMN04488090_2525 | Not Available | Negative | 3200901 - 3201521 | 23148.1 |
| outer membrane transport energization protein exbb | SAMN04488090_2526 | Not Available | Negative | 3201632 - 3202471 | 29598.8 |
| rnase hii | SAMN04488090_2527 | Not Available | Negative | 3202680 - 3203330 | 24280.0 |
| ca-activated chloride channel family protein | SAMN04488090_2528 | Not Available | Negative | 3203491 - 3204498 | 37243.4 |
| hypothetical protein | SAMN04488090_2529 | Not Available | Negative | 3204514 - 3205422 | 34190.4 |
| protein of unknown function duf58 | SAMN04488090_2530 | Not Available | Negative | 3205419 - 3206276 | 33342.2 |
| protein of unknown function | SAMN04488090_2531 | Not Available | Positive | 3206356 - 3206739 | 14395.2 |
| nadh dehydrogenase subunit a | SAMN04488090_2532 | Not Available | Positive | 3206736 - 3207200 | 17897.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
