Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN04488090_2513 | Not Available | Positive | 3186451 - 3186972 | 18393.1 |
| fructose-6-phosphate aldolase, talc/mipb family | SAMN04488090_2514 | Not Available | Positive | 3187065 - 3188078 | 36680.3 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN04488090_2515 | Not Available | Positive | 3188180 - 3188932 | 28111.5 |
| adenylate kinase | SAMN04488090_2516 | Not Available | Positive | 3189038 - 3189616 | 21229.6 |
| gtp-binding protein | SAMN04488090_2517 | Not Available | Positive | 3189840 - 3190844 | 36219.2 |
| hypothetical protein | SAMN04488090_2518 | Not Available | Positive | 3190866 - 3192593 | 65445.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2519 | Not Available | Positive | 3192811 - 3195621 | 102200.0 |
| hypothetical protein | SAMN04488090_2520 | Not Available | Negative | 3196098 - 3197906 | 66723.1 |
| phosphate transport system substrate-binding protein | SAMN04488090_2521 | Not Available | Negative | 3198140 - 3199096 | 35481.7 |
| hypothetical protein | SAMN04488090_2522 | Not Available | Negative | 3199093 - 3199320 | 8485.18 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
