Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488090_2483 | Not Available | Positive | 3149941 - 3150837 | 32869.2 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2484 | Not Available | Positive | 3151207 - 3152268 | 38173.1 |
| precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase | SAMN04488090_2485 | Not Available | Positive | 3152749 - 3153324 | 21611.3 |
| beta-lactamase class a | SAMN04488090_2486 | Not Available | Negative | 3153327 - 3154214 | 31865.5 |
| putative abc transport system atp-binding protein | SAMN04488090_2487 | Not Available | Negative | 3154211 - 3154837 | 23264.0 |
| two component transcriptional regulator, luxr family | SAMN04488090_2488 | Not Available | Negative | 3154898 - 3155560 | 24206.3 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488090_2489 | Not Available | Negative | 3155702 - 3157144 | 55110.9 |
| assimilatory nitrite reductase (nad(p)h) small subunit | SAMN04488090_2490 | Not Available | Negative | 3157194 - 3157532 | 12473.0 |
| assimilatory nitrite reductase (nad(p)h) large subunit precursor | SAMN04488090_2491 | Not Available | Negative | 3157554 - 3160070 | 91469.0 |
| uroporphyrinogen-iii c-methyltransferase | SAMN04488090_2492 | Not Available | Positive | 3160387 - 3161139 | 26616.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
