Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN04488090_2463 | Not Available | Positive | 3122162 - 3122539 | 13571.4 |
| hypothetical protein | SAMN04488090_2464 | Not Available | Positive | 3122704 - 3123501 | 30420.3 |
| ribonucrease y | SAMN04488090_2465 | Not Available | Negative | 3123552 - 3125123 | 59399.4 |
| cell division protein zapa | SAMN04488090_2466 | Not Available | Negative | 3125205 - 3125486 | 10914.4 |
| hypothetical protein | SAMN04488090_2467 | Not Available | Negative | 3125762 - 3126121 | 14036.9 |
| phenylalanyl-trna synthetase beta subunit | SAMN04488090_2468 | Not Available | Negative | 3126160 - 3128586 | 90013.9 |
| methyltransferase domain-containing protein | SAMN04488090_2469 | Not Available | Positive | 3128793 - 3129437 | 23853.6 |
| tonb protein c-terminal | SAMN04488090_2470 | Not Available | Positive | 3129711 - 3130760 | 40923.7 |
| membrane-associated protein | SAMN04488090_2471 | Not Available | Negative | 3130891 - 3131523 | 23730.6 |
| acyl-coa hydrolase | SAMN04488090_2472 | Not Available | Positive | 3131716 - 3132228 | 18812.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
