Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | SAMN04488090_2453 | Not Available | Positive | 3111414 - 3112343 | 34615.4 |
| protein of unknown function | SAMN04488090_2454 | Not Available | Negative | 3112391 - 3114829 | 90623.2 |
| hypothetical protein | SAMN04488090_2455 | Not Available | Positive | 3115196 - 3115717 | 18869.8 |
| conserved hypothetical protein | SAMN04488090_2456 | Not Available | Negative | 3115835 - 3116305 | 17684.4 |
| fructose-1,6-bisphosphatase i | SAMN04488090_2457 | Not Available | Negative | 3116448 - 3117464 | 37269.6 |
| hypothetical protein | SAMN04488090_2458 | Not Available | Positive | 3117792 - 3118259 | 17248.1 |
| putative transcriptional regulator | SAMN04488090_2459 | Not Available | Positive | 3118256 - 3118468 | 8027.81 |
| peroxiredoxin | SAMN04488090_2460 | Not Available | Positive | 3118569 - 3119954 | 51551.0 |
| uncharacterized membrane protein | SAMN04488090_2461 | Not Available | Negative | 3119957 - 3120901 | 34456.2 |
| predicted purr-regulated permease perm | SAMN04488090_2462 | Not Available | Negative | 3120923 - 3122044 | 40707.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
