Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ribulokinase | SAMN04488090_2443 | Not Available | Negative | 3096014 - 3097693 | 60725.2 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488090_2444 | Not Available | Negative | 3097911 - 3098600 | 27004.6 |
| alpha-n-arabinofuranosidase | SAMN04488090_2445 | Not Available | Negative | 3098790 - 3100319 | 56665.6 |
| protein of unknown function | SAMN04488090_2446 | Not Available | Negative | 3100539 - 3101207 | 24360.2 |
| starch-binding associating with outer membrane | SAMN04488090_2447 | Not Available | Negative | 3101209 - 3103047 | 69196.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_2448 | Not Available | Negative | 3103060 - 3106236 | 118438.0 |
| hypothetical protein | SAMN04488090_2449 | Not Available | Negative | 3106642 - 3107790 | 43667.7 |
| glutamine--fructose-6-phosphate transaminase | SAMN04488090_2450 | Not Available | Negative | 3107869 - 3109707 | 67786.8 |
| nudix-type nucleoside diphosphatase, yffh/adpp family | SAMN04488090_2451 | Not Available | Negative | 3109936 - 3110508 | 22277.5 |
| transcriptional regulator, deor family | SAMN04488090_2452 | Not Available | Positive | 3110621 - 3111370 | 27227.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
