Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | SAMN04488090_2433 | Not Available | Positive | 3084598 - 3085443 | 30719.4 |
| branched-chain amino acid aminotransferase | SAMN04488090_2434 | Not Available | Positive | 3085640 - 3086452 | 30419.7 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04488090_2435 | Not Available | Positive | 3086449 - 3087477 | 38988.0 |
| lysm domain-containing protein | SAMN04488090_2436 | Not Available | Positive | 3087606 - 3088079 | 17047.6 |
| calcineurin-like phosphoesterase | SAMN04488090_2437 | Not Available | Positive | 3088245 - 3089432 | 45242.0 |
| transcriptional regulator, arac family | SAMN04488090_2438 | Not Available | Positive | 3089475 - 3090290 | 30744.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_2439 | Not Available | Positive | 3090334 - 3091959 | 60500.5 |
| solute:na+ symporter, sss family | SAMN04488090_2440 | Not Available | Negative | 3092099 - 3093754 | 60229.5 |
| l-ribulose 5-phosphate 4-epimerase | SAMN04488090_2441 | Not Available | Negative | 3093784 - 3094482 | 26022.1 |
| l-arabinose isomerase | SAMN04488090_2442 | Not Available | Negative | 3094537 - 3096021 | 55187.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
