Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2422 | Not Available | Positive | 3076408 - 3076860 | 16809.5 |
| hypothetical protein | SAMN04488090_2423 | Not Available | Positive | 3076965 - 3077177 | 7840.42 |
| methyltransferase domain-containing protein | SAMN04488090_2424 | Not Available | Negative | 3077276 - 3077896 | 23491.9 |
| hypothetical protein | SAMN04488090_2425 | Not Available | Negative | 3077897 - 3078148 | 9269.22 |
| hypothetical protein | SAMN04488090_2426 | Not Available | Positive | 3078270 - 3078545 | 10378.7 |
| arac-type dna-binding protein | SAMN04488090_2428 | Not Available | Positive | 3079145 - 3080008 | 32496.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488090_2429 | Not Available | Positive | 3080094 - 3080954 | 31207.6 |
| outer membrane protein ompa | SAMN04488090_2430 | Not Available | Negative | 3081161 - 3082411 | 46690.5 |
| atp synthase f1 subcomplex epsilon subunit | SAMN04488090_2431 | Not Available | Negative | 3082569 - 3082811 | 8341.07 |
| atp synthase f1 subcomplex beta subunit | SAMN04488090_2432 | Not Available | Negative | 3082903 - 3084420 | 54413.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
