Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04488090_0230 | Not Available | Negative | 307969 - 308724 | 29021.0 |
| histidine kinase | SAMN04488090_0231 | Not Available | Negative | 308721 - 309725 | 38723.4 |
| glyoxalase-like domain-containing protein | SAMN04488090_0232 | Not Available | Positive | 310102 - 310539 | 16647.7 |
| sodium/hydrogen exchanger family protein | SAMN04488090_0233 | Not Available | Positive | 310546 - 311367 | 29440.0 |
| sodium/hydrogen exchanger family protein | SAMN04488090_0234 | Not Available | Positive | 311343 - 311825 | 17584.9 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488090_0235 | Not Available | Negative | 311854 - 312627 | 28239.8 |
| arac family transcriptional regulator, transcriptional activator of poba | SAMN04488090_0236 | Not Available | Negative | 312706 - 313596 | 34772.7 |
| l-amino acid n-acyltransferase ynca | SAMN04488090_0237 | Not Available | Positive | 313626 - 314216 | 21978.4 |
| hypothetical protein | SAMN04488090_0238 | Not Available | Positive | 314288 - 314677 | 14366.1 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488090_0239 | Not Available | Positive | 314791 - 317916 | 113526.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
