Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488090_2382 | Not Available | Positive | 3017351 - 3018058 | 25573.4 |
| peptidase family s41 | SAMN04488090_2383 | Not Available | Negative | 3018055 - 3019548 | 56426.9 |
| hypothetical protein | SAMN04488090_2384 | Not Available | Positive | 3019695 - 3020174 | 18159.8 |
| protein of unknown function | SAMN04488090_2385 | Not Available | Negative | 3020183 - 3021487 | 46404.4 |
| peptidylprolyl isomerase | SAMN04488090_2386 | Not Available | Positive | 3021625 - 3022053 | 15191.0 |
| response regulator receiver domain-containing protein | SAMN04488090_2387 | Not Available | Positive | 3022143 - 3022541 | 14707.5 |
| protein of unknown function | SAMN04488090_2388 | Not Available | Negative | 3022507 - 3022878 | 13575.5 |
| putative abc transport system atp-binding protein | SAMN04488090_2389 | Not Available | Negative | 3022882 - 3023589 | 26063.4 |
| hypothetical protein | SAMN04488090_2390 | Not Available | Negative | 3023621 - 3026041 | 90299.3 |
| hypothetical protein | SAMN04488090_2391 | Not Available | Positive | 3026203 - 3026787 | 21174.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
