Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-zinc-cadmium resistance protein czca | SAMN04488090_2352 | Not Available | Positive | 2979798 - 2984126 | 159091.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488090_2353 | Not Available | Positive | 2984174 - 2985397 | 44929.5 |
| hypothetical protein | SAMN04488090_2354 | Not Available | Positive | 2985588 - 2986211 | 22728.5 |
| cd2+/zn2+-exporting atpase | SAMN04488090_2355 | Not Available | Positive | 2986215 - 2988116 | 67535.4 |
| glycosyl hydrolase family 20, domain 2 | SAMN04488090_2356 | Not Available | Positive | 2988254 - 2990641 | 89700.4 |
| predicted hydrolase of the alpha/beta superfamily | SAMN04488090_2357 | Not Available | Negative | 2990706 - 2992112 | 53263.4 |
| peroxiredoxin | SAMN04488090_2358 | Not Available | Negative | 2992201 - 2993415 | 44520.6 |
| 16s rrna (cytosine1402-n4)-methyltransferase | SAMN04488090_2359 | Not Available | Positive | 2993609 - 2994532 | 34695.6 |
| hypothetical protein | SAMN04488090_2360 | Not Available | Positive | 2994536 - 2994871 | 12921.8 |
| cell division protein ftsi (penicillin-binding protein 3) | SAMN04488090_2361 | Not Available | Positive | 2994890 - 2997157 | 84935.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
