Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN04488090_2342 | Not Available | Negative | 2970643 - 2972046 | 50949.6 |
| thioredoxin | SAMN04488090_2343 | Not Available | Negative | 2972043 - 2972351 | 11438.1 |
| thioredoxin 1 | SAMN04488090_2344 | Not Available | Negative | 2972357 - 2972662 | 11698.3 |
| hypothetical protein | SAMN04488090_2345 | Not Available | Negative | 2972700 - 2973500 | 28729.5 |
| transcriptional regulator, arsr family | SAMN04488090_2346 | Not Available | Negative | 2973502 - 2973810 | 11708.4 |
| transporter, sss family | SAMN04488090_2347 | Not Available | Positive | 2974041 - 2975465 | 51088.9 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488090_2348 | Not Available | Negative | 2975446 - 2976132 | 26054.4 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04488090_2349 | Not Available | Negative | 2976157 - 2978007 | 69972.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_2350 | Not Available | Positive | 2978466 - 2979278 | 30664.1 |
| hypothetical protein | SAMN04488090_2351 | Not Available | Positive | 2979398 - 2979733 | 12061.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
