Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_2332 | Not Available | Negative | 2959890 - 2961302 | 54575.4 |
| phosphoethanolamine transferase for glucans (opg), alkaline phosphatase superfamily | SAMN04488090_2333 | Not Available | Negative | 2961497 - 2962900 | 53208.2 |
| predicted dehydrogenase | SAMN04488090_2334 | Not Available | Negative | 2962974 - 2964296 | 48486.8 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04488090_2335 | Not Available | Negative | 2964323 - 2965294 | 36796.5 |
| thiamine biosynthesis lipoprotein | SAMN04488090_2336 | Not Available | Negative | 2965367 - 2966356 | 36058.6 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | SAMN04488090_2337 | Not Available | Negative | 2966356 - 2967810 | 52823.2 |
| hypothetical protein | SAMN04488090_2338 | Not Available | Positive | 2967921 - 2969135 | 44149.9 |
| uncharacterized conserved protein, duf983 family | SAMN04488090_2339 | Not Available | Negative | 2969140 - 2969538 | 15300.7 |
| hypothetical protein | SAMN04488090_2340 | Not Available | Negative | 2969616 - 2970083 | 16861.1 |
| hypothetical protein | SAMN04488090_2341 | Not Available | Negative | 2970080 - 2970640 | 20422.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
